Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lps assembly lipoprotein lpte | EQ825_13605 | Not Available | Positive | 2829256 - 2829837 | 21357.8 |
| dna polymerase iii subunit delta | EQ825_13610 | Not Available | Positive | 2829837 - 2830868 | 38702.0 |
| nicotinate-nucleotide adenylyltransferase | EQ825_13615 | Not Available | Positive | 2830870 - 2831511 | 24529.3 |
| adenosylcobalamin/alpha-ribazole phosphatase | EQ825_13620 | Not Available | Positive | 2831535 - 2832146 | 23386.8 |
| ribosome silencing factor | EQ825_13625 | Not Available | Positive | 2832406 - 2832723 | 11524.9 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | EQ825_13630 | Not Available | Positive | 2832727 - 2833194 | 17342.1 |
| penicillin-binding protein 2 | EQ825_13635 | Not Available | Positive | 2833225 - 2835126 | 70860.6 |
| rod shape-determining protein roda | EQ825_13640 | Not Available | Positive | 2835129 - 2836241 | 40478.6 |
| endolytic peptidoglycan transglycosylase rlpa | EQ825_13645 | Not Available | Positive | 2836252 - 2837340 | 37475.0 |
| serine-type d-ala-d-ala carboxypeptidase | EQ825_13650 | Not Available | Positive | 2837480 - 2838691 | 44446.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





