Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar efflux transporter setb | EQ825_13300 | Not Available | Positive | 2766298 - 2767479 | 42692.5 |
| ykgj family cysteine cluster protein | EQ825_13305 | Not Available | Negative | 2767476 - 2767730 | 8954.96 |
| elongation factor p-like protein yeip | EQ825_13310 | Not Available | Positive | 2767885 - 2768457 | 21533.9 |
| mannitol dehydrogenase family protein | EQ825_13315 | Not Available | Positive | 2768679 - 2770145 | 53990.8 |
| gtp-binding protein | EQ825_13320 | Not Available | Positive | 2770263 - 2771249 | 36059.3 |
| phosphatase pap2 family protein | EQ825_13325 | Not Available | Positive | 2771288 - 2772001 | 26760.7 |
| bifunctional murein dd-endopeptidase/murein ld-carboxypeptidase | EQ825_13330 | Not Available | Positive | 2772413 - 2772979 | 21041.1 |
| cyclic di-gmp phosphodiesterase | EQ825_13335 | Not Available | Positive | 2773160 - 2774716 | 58545.4 |
| abc transporter substrate-binding protein | EQ825_13340 | Not Available | Positive | 2774798 - 2776612 | 69815.7 |
| abc transporter permease | EQ825_13345 | Not Available | Positive | 2776613 - 2777707 | 40362.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





