Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna dihydrouridine(16) synthase dusc | EQ825_13145 | Not Available | Negative | 2732097 - 2733047 | 35397.8 |
| hypothetical protein | EQ825_13150 | Not Available | Positive | 2733286 - 2733684 | 14593.6 |
| cidb/lrgb family autolysis modulator | EQ825_13155 | Not Available | Positive | 2733681 - 2734376 | 24471.1 |
| cytidine deaminase | EQ825_13160 | Not Available | Positive | 2734506 - 2735390 | 31541.6 |
| outer membrane permeability protein sana | EQ825_13165 | Not Available | Positive | 2735540 - 2736259 | 27288.5 |
| duf2542 family protein | EQ825_13170 | Not Available | Positive | 2736262 - 2736501 | 9264.61 |
| nad(p)-dependent oxidoreductase | EQ825_13175 | Not Available | Positive | 2736695 - 2737933 | 44338.2 |
| nad-dependent dihydropyrimidine dehydrogenase subunit prea | EQ825_13180 | Not Available | Positive | 2737927 - 2739162 | 45071.4 |
| galactose/methyl galactoside abc transporter permease mglc | EQ825_13185 | Not Available | Negative | 2739233 - 2740243 | 35586.4 |
| galactose/methyl galactoside abc transporter atp-binding protein mgla | EQ825_13190 | Not Available | Negative | 2740259 - 2741779 | 56418.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





