Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | EQ825_13095 | Not Available | Negative | 2720001 - 2721158 | 41224.3 |
| abc transporter substrate-binding protein | EQ825_13100 | Not Available | Negative | 2721165 - 2722082 | 32662.0 |
| beta-glucosidase bglx | EQ825_13105 | Not Available | Negative | 2722334 - 2724631 | 83476.8 |
| d-lactate dehydrogenase | EQ825_13110 | Not Available | Positive | 2724827 - 2726542 | 64680.0 |
| d-alanyl-d-alanine endopeptidase | EQ825_13115 | Not Available | Negative | 2726581 - 2727513 | 33889.4 |
| yip1 family protein | EQ825_13120 | Not Available | Negative | 2727687 - 2728274 | 21692.0 |
| deda family protein | EQ825_13125 | Not Available | Positive | 2728444 - 2729022 | 21422.9 |
| sdr family oxidoreductase | EQ825_13130 | Not Available | Negative | 2729152 - 2729913 | 26987.5 |
| multidrug resistance outer membrane protein mdtq | EQ825_13135 | Not Available | Negative | 2729966 - 2731492 | 55661.3 |
| protein yohp | EQ825_13140 | Not Available | Positive | 2731626 - 2731709 | 3092.28 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





