Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adp-ribosylglycohydrolase family protein | EQ825_12935 | Not Available | Positive | 2677988 - 2678992 | 35631.5 |
| sugar kinase | EQ825_12940 | Not Available | Positive | 2678989 - 2679954 | 34375.4 |
| gntr family transcriptional regulator | EQ825_12945 | Not Available | Negative | 2679928 - 2680674 | 28278.8 |
| glycosyl hydrolase 25 family protein | EQ825_12950 | Not Available | Negative | 2680726 - 2681544 | 31567.8 |
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | EQ825_12955 | Not Available | Negative | 2681609 - 2682409 | 28635.2 |
| hydroxyethylthiazole kinase | EQ825_12960 | Not Available | Negative | 2682406 - 2683194 | 27236.5 |
| ni(ii)/co(ii)-binding transcriptional repressor rcnr | EQ825_12965 | Not Available | Negative | 2683417 - 2683689 | 10134.5 |
| nickel/cobalt efflux protein rcna | EQ825_12970 | Not Available | Positive | 2683812 - 2684636 | 30436.2 |
| ni(ii)/co(ii) efflux transporter accessory subunit rcnb | EQ825_12975 | Not Available | Positive | 2684855 - 2685193 | 12466.8 |
| putative fimbrial-like adhesin protein | EQ825_12980 | Not Available | Negative | 2685274 - 2686308 | 36922.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





