Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EQ825_00025 | Not Available | Positive | 4113 - 5099 | 38754.7 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 4361 - 4476 | Not Available |
| Trna-ser | Not Available | Not Available | Positive | 5292 - 5379 | Not Available |
| glyoxylate/hydroxypyruvate reductase ghra | EQ825_00035 | Not Available | Positive | 5613 - 6551 | 35340.4 |
| phosphatase | EQ825_00040 | Not Available | Positive | 6606 - 7343 | 26833.9 |
| molecular chaperone | EQ825_00045 | Not Available | Positive | 7367 - 7921 | 20711.3 |
| duf1097 domain-containing protein | EQ825_00050 | Not Available | Positive | 8023 - 8514 | 17105.5 |
| curli production assembly/transport protein csgg | EQ825_00055 | Not Available | Negative | 8578 - 9411 | 30559.0 |
| curli production assembly/transport protein csgf | EQ825_00060 | Not Available | Negative | 9438 - 9854 | 15056.7 |
| curli production assembly/transport protein csge | EQ825_00065 | Not Available | Negative | 9879 - 10268 | 14879.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





