Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EQ825_12580 | Not Available | Positive | 2597960 - 2598616 | 24446.3 |
| abc transporter permease | EQ825_12585 | Not Available | Positive | 2598617 - 2598967 | 13554.6 |
| hypothetical protein | EQ825_12590 | Not Available | Negative | 2599291 - 2599575 | 10375.7 |
| lps o-antigen chain length determinant protein wzzb | EQ825_12595 | Not Available | Negative | 2600159 - 2601136 | 36234.7 |
| udp-glucose 6-dehydrogenase | EQ825_12600 | Not Available | Negative | 2601282 - 2602448 | 43571.2 |
| hypothetical protein | EQ825_12610 | Not Available | Negative | 2603166 - 2603390 | 8234.06 |
| nadp-dependent phosphogluconate dehydrogenase | EQ825_12615 | Not Available | Negative | 2603407 - 2604813 | 51454.1 |
| glycosyltransferase | EQ825_12620 | Not Available | Negative | 2604962 - 2605780 | 31845.2 |
| capsular biosynthesis protein | EQ825_12625 | Not Available | Negative | 2605787 - 2606806 | 40291.1 |
| o160 family o-antigen polymerase | EQ825_12630 | Not Available | Negative | 2606803 - 2607903 | 43217.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





