Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cold-shock protein | EQ825_12280 | Not Available | Positive | 2526471 - 2526659 | 7104.55 |
| protein ymce | EQ825_12285 | Not Available | Positive | 2526634 - 2526864 | 8727.65 |
| addiction module toxin, gnsa/gnsb family | EQ825_12290 | Not Available | Positive | 2526854 - 2527027 | 6575.99 |
| 4fe-4s binding protein | EQ825_12295 | Not Available | Negative | 2527076 - 2528149 | 40176.4 |
| tmao reductase system sensor histidine kinase/response regulator tors | EQ825_12300 | Not Available | Negative | 2528221 - 2530965 | 100895.0 |
| tmao reductase system periplasmic protein tort | EQ825_12305 | Not Available | Positive | 2531048 - 2532076 | 37924.0 |
| two-component system response regulator torr | EQ825_12310 | Not Available | Negative | 2532049 - 2532741 | 26270.9 |
| pentaheme c-type cytochrome torc | EQ825_12315 | Not Available | Positive | 2532871 - 2534043 | 43658.9 |
| trimethylamine-n-oxide reductase tora | EQ825_12320 | Not Available | Positive | 2534043 - 2536589 | 94558.3 |
| molecular chaperone tord | EQ825_12325 | Not Available | Positive | 2536586 - 2537185 | 22503.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





