Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| appa family phytase/histidine-type acid phosphatase | EQ825_12230 | Not Available | Positive | 2516170 - 2517474 | 47358.9 |
| tyrosine-protein kinase | EQ825_12235 | Not Available | Negative | 2517594 - 2519774 | 81333.7 |
| protein-tyrosine-phosphatase | EQ825_12240 | Not Available | Negative | 2519794 - 2520240 | 16386.9 |
| polysaccharide export protein | EQ825_12245 | Not Available | Negative | 2520228 - 2521367 | 41743.2 |
| yjbh domain-containing protein | EQ825_12250 | Not Available | Negative | 2521413 - 2523509 | 78675.2 |
| hypothetical protein | EQ825_12255 | Not Available | Negative | 2523509 - 2524255 | 27278.6 |
| yjbf family lipoprotein | EQ825_12260 | Not Available | Negative | 2524252 - 2524896 | 24249.9 |
| threonine-rich inner membrane protein gfca | EQ825_12265 | Not Available | Negative | 2525003 - 2525308 | 9447.98 |
| cold shock-like protein csph | EQ825_12270 | Not Available | Negative | 2525750 - 2525962 | 7720.48 |
| cold shock protein cspg | EQ825_12275 | Not Available | Positive | 2526248 - 2526460 | 7781.14 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





