Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid permease | EQ825_11825 | Not Available | Positive | 2424426 - 2425856 | 52480.5 |
| pyruvate formate lyase 1-activating protein | EQ825_11835 | Not Available | Negative | 2426066 - 2426806 | 28205.9 |
| formate c-acetyltransferase | EQ825_11840 | Not Available | Negative | 2426998 - 2429280 | 85355.0 |
| formate transporter foca | EQ825_11845 | Not Available | Negative | 2429335 - 2430192 | 30992.6 |
| 30s ribosomal protein s12 methylthiotransferase accessory protein ycao | EQ825_11850 | Not Available | Negative | 2430598 - 2432358 | 65640.9 |
| duf421 domain-containing protein | EQ825_11855 | Not Available | Positive | 2432488 - 2433180 | 26283.5 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | EQ825_11860 | Not Available | Positive | 2433379 - 2434467 | 39828.5 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | EQ825_11865 | Not Available | Positive | 2434538 - 2435821 | 46098.5 |
| metalloprotease | EQ825_11870 | Not Available | Positive | 2435990 - 2436754 | 26796.7 |
| (d)cmp kinase | EQ825_11875 | Not Available | Positive | 2436927 - 2437610 | 24747.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





