Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts mannose/fructose/sorbose transporter subunit iic | EQ825_11705 | Not Available | Positive | 2393263 - 2394060 | 27919.9 |
| pts system mannose/fructose/sorbose family transporter subunit iid | EQ825_11710 | Not Available | Positive | 2394071 - 2394895 | 29461.8 |
| l-sorbose 1-phosphate reductase | EQ825_11715 | Not Available | Positive | 2394947 - 2396176 | 44775.2 |
| dipeptidase pepe | EQ825_11720 | Not Available | Positive | 2396557 - 2397246 | 24571.7 |
| na/pi cotransporter family protein | EQ825_11725 | Not Available | Negative | 2397337 - 2398968 | 59470.7 |
| methionine synthase | EQ825_11730 | Not Available | Negative | 2399188 - 2402871 | 136096.0 |
| glyoxylate bypass operon transcriptional repressor iclr | EQ825_11735 | Not Available | Positive | 2403071 - 2403895 | 29741.1 |
| bifunctional isocitrate dehydrogenase kinase/phosphatase | EQ825_11745 | Not Available | Negative | 2405754 - 2407490 | 67674.3 |
| isocitrate lyase | EQ825_11750 | Not Available | Negative | 2407673 - 2408977 | 47524.1 |
| malate synthase a | EQ825_11755 | Not Available | Negative | 2409007 - 2410608 | 60321.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





