Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf485 domain-containing protein | EQ825_11440 | Not Available | Positive | 2335168 - 2335482 | 11672.3 |
| cation/acetate symporter actp | EQ825_11445 | Not Available | Positive | 2335479 - 2337128 | 59200.7 |
| pentapeptide repeat-containing protein | EQ825_11450 | Not Available | Positive | 2337306 - 2338598 | 49439.1 |
| na+/h+ antiporter | EQ825_11455 | Not Available | Negative | 2338752 - 2340401 | 60527.5 |
| ncs2 family permease | EQ825_11460 | Not Available | Negative | 2340552 - 2341901 | 45714.4 |
| redox-sensitive transcriptional activator soxr | EQ825_11465 | Not Available | Negative | 2342447 - 2342911 | 17150.7 |
| superoxide response transcriptional regulator soxs | EQ825_11470 | Not Available | Positive | 2342997 - 2343320 | 12911.6 |
| c-di-gmp phosphodiesterase pdec | EQ825_11475 | Not Available | Negative | 2343323 - 2344909 | 60834.8 |
| hypothetical protein | EQ825_11480 | Not Available | Positive | 2345339 - 2345620 | 10304.0 |
| single-stranded dna-binding protein ssb1 | EQ825_11485 | Not Available | Negative | 2345719 - 2346255 | 18976.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





