Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oligoribonuclease | EQ825_10940 | Not Available | Negative | 2227010 - 2227555 | 20816.8 |
| small ribosomal subunit biogenesis gtpase rsga | EQ825_10945 | Not Available | Positive | 2227650 - 2228702 | 39167.5 |
| phosphatidylserine decarboxylase | EQ825_10950 | Not Available | Positive | 2228799 - 2229767 | 35936.4 |
| miniconductance mechanosensitive channel mscm | EQ825_10955 | Not Available | Positive | 2229789 - 2233112 | 124020.0 |
| glutamate/gamma-aminobutyrate family transporter yjem | EQ825_10960 | Not Available | Negative | 2233263 - 2234765 | 54679.2 |
| elongation factor p--(r)-beta-lysine ligase | EQ825_10965 | Not Available | Negative | 2234984 - 2235961 | 36978.1 |
| fumarate reductase (quinol) flavoprotein subunit | EQ825_10970 | Not Available | Positive | 2236286 - 2238094 | 65975.5 |
| succinate dehydrogenase/fumarate reductase iron-sulfur subunit | EQ825_10975 | Not Available | Positive | 2238087 - 2238821 | 27124.5 |
| fumarate reductase subunit frdc | EQ825_10980 | Not Available | Positive | 2238832 - 2239227 | 15015.8 |
| fumarate reductase subunit frdd | EQ825_10985 | Not Available | Positive | 2239238 - 2239597 | 13107.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





