Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class ii aldolase | EQ825_10485 | Not Available | Positive | 2140585 - 2141445 | 31419.8 |
| type ii toxin-antitoxin system hicb family antitoxin | EQ825_10490 | Not Available | Negative | 2141495 - 2141854 | 13403.0 |
| type ii toxin-antitoxin system hica family toxin | EQ825_10495 | Not Available | Negative | 2141851 - 2142126 | 10186.5 |
| abc transporter permease | EQ825_10500 | Not Available | Negative | 2142199 - 2143323 | 40997.1 |
| abc transporter atp-binding protein/permease | EQ825_10505 | Not Available | Negative | 2143323 - 2146058 | 100761.0 |
| hlyd family secretion protein | EQ825_10510 | Not Available | Negative | 2146055 - 2147122 | 38858.6 |
| duf4049 domain-containing protein | EQ825_10515 | Not Available | Negative | 2147488 - 2149110 | 61081.7 |
| duf4049 domain-containing protein | EQ825_10520 | Not Available | Negative | 2149372 - 2150982 | 61997.5 |
| duf2776 domain-containing protein | EQ825_10525 | Not Available | Positive | 2151365 - 2152417 | 37659.3 |
| nad(p)/fad-dependent oxidoreductase | EQ825_10530 | Not Available | Negative | 2152734 - 2153936 | 43801.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





