Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxymuconolactone decarboxylase family protein | EQ825_09375 | Not Available | Negative | 1912606 - 1913154 | 20568.1 |
| tvp38/tmem64 family protein | EQ825_09380 | Not Available | Negative | 1913154 - 1913861 | 26140.8 |
| protein ydjy | EQ825_09385 | Not Available | Negative | 1913876 - 1914553 | 24216.7 |
| tvp38/tmem64 family protein | EQ825_09390 | Not Available | Negative | 1914558 - 1915268 | 26121.8 |
| exodeoxyribonuclease iii | EQ825_09395 | Not Available | Negative | 1915435 - 1916241 | 30938.8 |
| aspartate aminotransferase family protein | EQ825_09400 | Not Available | Positive | 1916687 - 1917907 | 43545.6 |
| arginine n-succinyltransferase | EQ825_09405 | Not Available | Positive | 1917904 - 1918938 | 38486.0 |
| succinylglutamate-semialdehyde dehydrogenase | EQ825_09410 | Not Available | Positive | 1918935 - 1920413 | 53005.4 |
| n-succinylarginine dihydrolase | EQ825_09415 | Not Available | Positive | 1920410 - 1921753 | 49388.5 |
| succinylglutamate desuccinylase | EQ825_09420 | Not Available | Positive | 1921746 - 1922714 | 35831.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





