Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yoah family protein | EQ825_09075 | Not Available | Positive | 1853722 - 1853901 | 6554.7 |
| duf1889 family protein | EQ825_09080 | Not Available | Negative | 1854021 - 1854380 | 13232.0 |
| rida family protein | EQ825_09085 | Not Available | Negative | 1854742 - 1855086 | 12523.9 |
| atp-dependent dna helicase | EQ825_09090 | Not Available | Positive | 1855218 - 1857128 | 70365.9 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | EQ825_09095 | Not Available | Positive | 1857186 - 1857881 | 25138.3 |
| slp family lipoprotein yeay | EQ825_09100 | Not Available | Positive | 1857921 - 1858502 | 20922.4 |
| long-chain-fatty-acid--coa ligase fadd | EQ825_09105 | Not Available | Positive | 1858707 - 1860392 | 62335.7 |
| ribonuclease d | EQ825_09110 | Not Available | Positive | 1860474 - 1861589 | 42183.9 |
| carnitine monooxygenase subunit yeax | EQ825_09115 | Not Available | Negative | 1861643 - 1862608 | 35659.2 |
| carnitine monooxygenase subunit yeaw | EQ825_09120 | Not Available | Negative | 1862664 - 1863788 | 42563.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





