Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| invasion protein | EQ825_08415 | Not Available | Positive | 1733586 - 1733879 | 11202.4 |
| escu/yscu/hrcu family type iii secretion system export apparatus switch protein | EQ825_08420 | Not Available | Negative | 1733951 - 1735063 | 42963.8 |
| esct/ysct/hrct family type iii secretion system export apparatus protein | EQ825_08425 | Not Available | Negative | 1735072 - 1735839 | 28208.8 |
| escs/yscs/hrcs family type iii secretion system export apparatus protein | EQ825_08430 | Not Available | Negative | 1735841 - 1736101 | 9430.85 |
| escr/yscr/hrcr family type iii secretion system export apparatus protein | EQ825_08435 | Not Available | Negative | 1736111 - 1736776 | 24526.4 |
| yscq/hrcq family type iii secretion apparatus protein | EQ825_08440 | Not Available | Negative | 1736766 - 1737713 | 36347.5 |
| effector protein | EQ825_08445 | Not Available | Negative | 1737713 - 1738282 | 22213.1 |
| transposase | EQ825_08460 | Not Available | Positive | 1738717 - 1738976 | 9261.01 |
| sos response-associated peptidase | EQ825_08465 | Not Available | Negative | 1738961 - 1739632 | 25128.7 |
| putative sulfurtransferase yedf | EQ825_08470 | Not Available | Negative | 1739741 - 1739974 | 8653.53 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





