Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hila family transcriptional regulator ygeh | EQ825_08360 | Not Available | Positive | 1725839 - 1727215 | 52646.7 |
| hypothetical protein | EQ825_08365 | Not Available | Positive | 1727383 - 1727601 | 8071.28 |
| lytic transglycosylase domain-containing protein | EQ825_08370 | Not Available | Positive | 1727685 - 1728188 | 19241.8 |
| luxr family transcriptional regulator | EQ825_08375 | Not Available | Negative | 1728206 - 1728838 | 23413.7 |
| hypothetical protein | EQ825_08380 | Not Available | Negative | 1729063 - 1729770 | 27310.0 |
| type iii secretion apparatus protein orga/mxik | EQ825_08385 | Not Available | Negative | 1729712 - 1730293 | 22722.8 |
| escj/yscj/hrcj family type iii secretion inner membrane ring protein | EQ825_08390 | Not Available | Negative | 1730309 - 1731043 | 27609.7 |
| hypothetical protein | EQ825_08395 | Not Available | Negative | 1731040 - 1731372 | 12299.7 |
| type iii secretion system needle complex protein | EQ825_08400 | Not Available | Negative | 1731392 - 1731631 | 9038.44 |
| luxr family transcriptional regulator | EQ825_08410 | Not Available | Positive | 1733084 - 1733584 | 19143.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





