Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i-e crispr-associated protein cas5/casd | EQ825_07850 | Not Available | Negative | 1611243 - 1611917 | 25210.2 |
| type i-e crispr-associated protein cas7/cse4/casc | EQ825_07855 | Not Available | Negative | 1611920 - 1613011 | 40071.8 |
| type i-e crispr-associated protein cse2/casb | EQ825_07860 | Not Available | Negative | 1613024 - 1613506 | 18696.6 |
| type i-e crispr-associated protein cse1/casa | EQ825_07865 | Not Available | Negative | 1613499 - 1615007 | 55933.4 |
| crispr-associated helicase/endonuclease cas3 | EQ825_07870 | Not Available | Negative | 1615451 - 1618087 | 99735.6 |
| phosphoadenosine phosphosulfate reductase | EQ825_07880 | Not Available | Negative | 1618445 - 1619179 | 27976.4 |
| assimilatory sulfite reductase (nadph) hemoprotein subunit | EQ825_07885 | Not Available | Negative | 1619253 - 1620965 | 63962.9 |
| nadph-dependent assimilatory sulfite reductase flavoprotein subunit | EQ825_07890 | Not Available | Negative | 1620965 - 1622764 | 66316.4 |
| 6-carboxytetrahydropterin synthase qued | EQ825_07895 | Not Available | Positive | 1623080 - 1623445 | 13773.6 |
| fad-dependent oxidoreductase | EQ825_07900 | Not Available | Positive | 1623523 - 1624794 | 46328.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





