Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein-serine/threonine phosphatase | EQ825_07745 | Not Available | Positive | 1593733 - 1594389 | 25057.6 |
| hypothetical protein | EQ825_07750 | Not Available | Negative | 1594430 - 1594666 | 9180.06 |
| ubid family decarboxylase | EQ825_07755 | Not Available | Negative | 1594677 - 1596104 | 52397.8 |
| ubix family flavin prenyltransferase | EQ825_07760 | Not Available | Negative | 1596104 - 1596697 | 21549.3 |
| marr family transcriptional regulator | EQ825_07765 | Not Available | Positive | 1596844 - 1597251 | 15479.8 |
| rna polymerase sigma factor rpos | EQ825_07770 | Not Available | Negative | 1597371 - 1598363 | 37975.1 |
| murein hydrolase activator nlpd | EQ825_07775 | Not Available | Negative | 1598426 - 1599565 | 40151.3 |
| protein-l-isoaspartate o-methyltransferase | EQ825_07780 | Not Available | Negative | 1599705 - 1600331 | 23259.2 |
| 5'/3'-nucleotidase sure | EQ825_07785 | Not Available | Negative | 1600325 - 1601086 | 26902.0 |
| trna pseudouridine(13) synthase trud | EQ825_07790 | Not Available | Negative | 1601067 - 1602116 | 39078.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





