Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EQ825_07695 | Not Available | Negative | 1584496 - 1584714 | 8023.74 |
| hydrogenase maturation nickel metallochaperone hypa | EQ825_07700 | Not Available | Positive | 1584620 - 1584970 | 13138.8 |
| hydrogenase nickel incorporation protein hypb | EQ825_07705 | Not Available | Positive | 1584974 - 1585846 | 31566.8 |
| hypc/hybg/hupf family hydrogenase formation chaperone | EQ825_07710 | Not Available | Positive | 1585837 - 1586109 | 9732.58 |
| hydrogenase formation protein hypd | EQ825_07715 | Not Available | Positive | 1586109 - 1587230 | 41366.7 |
| hydrogenase expression/formation protein hype | EQ825_07720 | Not Available | Positive | 1587227 - 1588237 | 35112.6 |
| formate hydrogenlyase transcriptional activator flha | EQ825_07725 | Not Available | Positive | 1588311 - 1590389 | 78415.4 |
| nitrous oxide-stimulated promoter family protein | EQ825_07730 | Not Available | Negative | 1590426 - 1590779 | 13959.3 |
| hypothetical protein | EQ825_07735 | Not Available | Negative | 1590811 - 1590990 | 6752.81 |
| dna mismatch repair protein muts | EQ825_07740 | Not Available | Positive | 1591066 - 1593627 | 95224.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





