Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator tdca | EQ825_07015 | Not Available | Negative | 1461526 - 1462464 | 34540.9 |
| dna-binding transcriptional activator tdcr | EQ825_07020 | Not Available | Positive | 1462653 - 1462997 | 13553.3 |
| hypothetical protein | EQ825_07025 | Not Available | Positive | 1463253 - 1463792 | 20568.6 |
| glycerate 2-kinase | EQ825_07040 | Not Available | Negative | 1465638 - 1466783 | 39122.7 |
| 2-hydroxy-3-oxopropionate reductase | EQ825_07045 | Not Available | Negative | 1466880 - 1467770 | 30661.6 |
| 2-dehydro-3-deoxyglucarate aldolase | EQ825_07050 | Not Available | Negative | 1467800 - 1468570 | 27400.6 |
| mfs transporter | EQ825_07055 | Not Available | Negative | 1468586 - 1469920 | 48970.0 |
| galactarate dehydratase | EQ825_07060 | Not Available | Positive | 1470295 - 1471866 | 56390.9 |
| type ii toxin-antitoxin system prlf family antitoxin | EQ825_07065 | Not Available | Positive | 1472015 - 1472350 | 12359.7 |
| type ii toxin-antitoxin system yhav family toxin | EQ825_07070 | Not Available | Positive | 1472350 - 1472814 | 17867.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





