Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | EQ825_06765 | Not Available | Negative | 1405865 - 1406878 | 36009.5 |
| 30s ribosomal protein s21 | EQ825_06770 | Not Available | Positive | 1407116 - 1407331 | 8500.42 |
| dna primase | EQ825_06775 | Not Available | Positive | 1407442 - 1409187 | 65568.5 |
| rna polymerase sigma factor rpod | EQ825_06780 | Not Available | Positive | 1409382 - 1411223 | 70197.2 |
| g/u mismatch-specific dna glycosylase | EQ825_06785 | Not Available | Negative | 1411302 - 1411808 | 18688.5 |
| Trna-met | Not Available | Not Available | Positive | 1411933 - 1412008 | Not Available |
| siderophore-interacting protein | EQ825_06795 | Not Available | Negative | 1412062 - 1412826 | 28975.2 |
| padr family transcriptional regulator | EQ825_06800 | Not Available | Positive | 1413114 - 1413737 | 23416.7 |
| pas domain s-box protein | EQ825_06805 | Not Available | Negative | 1413785 - 1415305 | 55020.9 |
| putrescine aminotransferase | EQ825_06810 | Not Available | Positive | 1415612 - 1417102 | 53855.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





