Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hyad/hybd family hydrogenase maturation endopeptidase | EQ825_06465 | Not Available | Negative | 1344572 - 1345066 | 17712.8 |
| hydrogenase 2 large subunit | EQ825_06470 | Not Available | Negative | 1345066 - 1346769 | 62450.6 |
| ni/fe-hydrogenase cytochrome b subunit | EQ825_06475 | Not Available | Negative | 1346766 - 1347944 | 43604.7 |
| hydrogenase 2 operon protein hyba | EQ825_06480 | Not Available | Negative | 1347934 - 1348920 | 36005.0 |
| hydrogenase 2 small subunit | EQ825_06485 | Not Available | Negative | 1348923 - 1350041 | 39654.3 |
| duf2623 domain-containing protein | EQ825_06490 | Not Available | Negative | 1350230 - 1350517 | 10946.1 |
| dienelactone hydrolase family protein | EQ825_06495 | Not Available | Negative | 1350636 - 1351523 | 32554.6 |
| aldo/keto reductase | EQ825_06500 | Not Available | Positive | 1351680 - 1352720 | 38817.3 |
| tigr00645 family protein | EQ825_06505 | Not Available | Negative | 1352760 - 1353254 | 18642.3 |
| sdr family oxidoreductase | EQ825_06510 | Not Available | Positive | 1353445 - 1354329 | 31489.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





