Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain-containing protein | EQ825_05970 | Not Available | Positive | 1245115 - 1247055 | 72519.4 |
| is110 family transposase | EQ825_05990 | Not Available | Positive | 1248865 - 1250061 | 43072.6 |
| aaa family atpase | EQ825_06000 | Not Available | Negative | 1250540 - 1251322 | 29307.7 |
| is21 family transposase | EQ825_06005 | Not Available | Positive | 1251489 - 1252988 | 57473.5 |
| 3-methylitaconate isomerase | EQ825_06015 | Not Available | Negative | 1254229 - 1255386 | 41511.0 |
| 3-isopropylmalate dehydratase | EQ825_06020 | Not Available | Negative | 1255376 - 1255879 | 18370.0 |
| 3-isopropylmalate dehydratase large subunit | EQ825_06025 | Not Available | Negative | 1255890 - 1257155 | 45333.7 |
| hydroxymethylglutaryl-coa lyase | EQ825_06030 | Not Available | Negative | 1257224 - 1258168 | 34291.6 |
| coa transferase | EQ825_06035 | Not Available | Negative | 1258171 - 1259364 | 43235.2 |
| transposase | EQ825_06045 | Not Available | Positive | 1260104 - 1260454 | 13197.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





