Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | EQ825_05880 | Not Available | Positive | 1230347 - 1231351 | 37520.6 |
| haaap family serine/threonine permease | EQ825_05885 | Not Available | Negative | 1231381 - 1232652 | 47285.3 |
| type i toxin-antitoxin system toxin ldr family protein | EQ825_05895 | Not Available | Positive | 1233128 - 1233235 | 3882.93 |
| type i toxin-antitoxin system toxin ldr family protein | EQ825_05905 | Not Available | Positive | 1233611 - 1233692 | 2843.63 |
| is3 family transposase | EQ825_05910 | Not Available | Positive | 1233693 - 1233834 | 5599.48 |
| arginine deiminase | EQ825_05920 | Not Available | Positive | 1235534 - 1236754 | 45775.5 |
| carbamate kinase | EQ825_05925 | Not Available | Positive | 1236765 - 1237655 | 31560.2 |
| lactate utilization protein c | EQ825_05935 | Not Available | Positive | 1238225 - 1238920 | 25022.0 |
| eama family transporter | EQ825_05950 | Not Available | Negative | 1240441 - 1241379 | 33759.9 |
| group ii intron reverse transcriptase/maturase | EQ825_05960 | Not Available | Negative | 1242849 - 1244150 | 49598.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





