Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xylose isomerase | EQ825_05725 | Not Available | Positive | 1198261 - 1199583 | 49721.7 |
| xylulokinase | EQ825_05730 | Not Available | Positive | 1199655 - 1201109 | 52637.3 |
| hypothetical protein | EQ825_05735 | Not Available | Positive | 1201278 - 1201619 | 12553.0 |
| yiab family inner membrane protein | EQ825_05740 | Not Available | Positive | 1201665 - 1202102 | 16123.6 |
| acyltransferase | EQ825_05745 | Not Available | Negative | 1202144 - 1203139 | 37586.0 |
| hypothetical protein | EQ825_05750 | Not Available | Positive | 1203314 - 1203613 | 11324.8 |
| glycine--trna ligase subunit alpha | EQ825_05755 | Not Available | Positive | 1203708 - 1204619 | 34718.2 |
| glycine--trna ligase subunit beta | EQ825_05760 | Not Available | Positive | 1204629 - 1206698 | 76861.3 |
| type i toxin-antitoxin system toxin hoka | EQ825_05765 | Not Available | Positive | 1207020 - 1207172 | 5912.47 |
| rna chaperone/antiterminator cspa | EQ825_05770 | Not Available | Negative | 1207360 - 1207572 | 7403.66 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





