Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)h-dependent glycerol-3-phosphate dehydrogenase | EQ825_05500 | Not Available | Positive | 1144555 - 1145574 | 36314.8 |
| trna (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-o)- methyltransferase trml | EQ825_05510 | Not Available | Negative | 1146528 - 1147001 | 17658.1 |
| alpha-hydroxy-acid oxidizing protein | EQ825_05515 | Not Available | Negative | 1147156 - 1148346 | 42716.6 |
| transcriptional regulator lldr | EQ825_05520 | Not Available | Negative | 1148343 - 1149119 | 29167.9 |
| l-lactate permease | EQ825_05525 | Not Available | Negative | 1149119 - 1150774 | 59175.5 |
| peptide abc transporter permease | EQ825_05530 | Not Available | Negative | 1151202 - 1152893 | 57033.2 |
| duf3251 domain-containing protein | EQ825_05540 | Not Available | Negative | 1154462 - 1155013 | 20516.8 |
| yibl family ribosome-associated protein | EQ825_05545 | Not Available | Negative | 1155687 - 1156049 | 13782.9 |
| hypothetical protein | EQ825_05550 | Not Available | Positive | 1156334 - 1156543 | 7995.76 |
| mltr family transcriptional regulator | EQ825_05555 | Not Available | Negative | 1156555 - 1157142 | 21976.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





