Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dutp diphosphatase | EQ825_05350 | Not Available | Negative | 1117330 - 1117785 | 16157.4 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | EQ825_05355 | Not Available | Negative | 1117766 - 1118986 | 43440.7 |
| jab domain-containing protein | EQ825_05360 | Not Available | Positive | 1119158 - 1119826 | 25275.9 |
| 50s ribosomal protein l28 | EQ825_05365 | Not Available | Positive | 1120043 - 1120279 | 9007.02 |
| 50s ribosomal protein l33 | EQ825_05370 | Not Available | Positive | 1120300 - 1120467 | 6371.94 |
| bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyase | EQ825_05375 | Not Available | Positive | 1120565 - 1121374 | 30261.8 |
| pantetheine-phosphate adenylyltransferase | EQ825_05380 | Not Available | Negative | 1121413 - 1121892 | 17837.7 |
| 3-deoxy-d-manno-octulosonic acid transferase | EQ825_05385 | Not Available | Negative | 1121900 - 1123177 | 47293.9 |
| lipopolysaccharide core heptosyltransferase rfaq | EQ825_05390 | Not Available | Positive | 1123590 - 1124648 | 39448.9 |
| glycosyltransferase family 1 protein | EQ825_05395 | Not Available | Positive | 1124645 - 1125769 | 42530.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





