Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional gtp diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | EQ825_05300 | Not Available | Negative | 1107207 - 1109315 | 79347.1 |
| dna-directed rna polymerase subunit omega | EQ825_05305 | Not Available | Negative | 1109334 - 1109609 | 10237.2 |
| guanylate kinase | EQ825_05310 | Not Available | Negative | 1109664 - 1110287 | 23594.1 |
| nad-dependent dna ligase ligb | EQ825_05315 | Not Available | Positive | 1110545 - 1112227 | 63212.8 |
| trimeric intracellular cation channel family protein | EQ825_05320 | Not Available | Negative | 1112224 - 1112841 | 22049.8 |
| dna damage-inducible protein d | EQ825_05325 | Not Available | Negative | 1113132 - 1113956 | 31259.9 |
| yicc family protein | EQ825_05330 | Not Available | Negative | 1114177 - 1115040 | 33160.9 |
| ribonuclease ph | EQ825_05335 | Not Available | Positive | 1115167 - 1115883 | 25327.4 |
| orotate phosphoribosyltransferase | EQ825_05340 | Not Available | Positive | 1115949 - 1116590 | 23568.3 |
| nucleoid occlusion factor slma | EQ825_05345 | Not Available | Negative | 1116627 - 1117223 | 22837.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





