Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| purine ribonucleoside efflux pump nepi | EQ825_05195 | Not Available | Positive | 1071667 - 1072851 | 41629.3 |
| hila family transcriptional regulator eila | EQ825_05205 | Not Available | Negative | 1083929 - 1085626 | 63927.0 |
| ipad/sipd/sspd family type iii secretion system needle tip protein | EQ825_05210 | Not Available | Negative | 1085829 - 1087178 | 50117.0 |
| hypothetical protein | EQ825_05215 | Not Available | Negative | 1087222 - 1088373 | 43600.3 |
| type iii cell invasion protein sipb | EQ825_05220 | Not Available | Negative | 1088386 - 1090167 | 63967.3 |
| hypothetical protein | EQ825_05225 | Not Available | Negative | 1090223 - 1090405 | 6938.92 |
| cesd/sycd/lcrh family type iii secretion system chaperone | EQ825_05230 | Not Available | Negative | 1090415 - 1090912 | 19084.7 |
| hypothetical protein | EQ825_05235 | Not Available | Negative | 1091214 - 1091507 | 11065.4 |
| lipoprotein nlpa | EQ825_05240 | Not Available | Positive | 1091716 - 1092534 | 29421.3 |
| dmt family transporter | EQ825_05245 | Not Available | Negative | 1092538 - 1093461 | 33115.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





