Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EQ825_04890 | Not Available | Positive | 1006383 - 1006589 | 8012.06 |
| type iii effector protein | EQ825_04900 | Not Available | Positive | 1007122 - 1009101 | 77152.3 |
| type iii effector protein | EQ825_04905 | Not Available | Negative | 1009555 - 1010742 | 46330.1 |
| type iii effector | EQ825_04910 | Not Available | Positive | 1011043 - 1013451 | 93136.2 |
| 6-phosphogluconate phosphatase | EQ825_04915 | Not Available | Negative | 1013588 - 1014253 | 24742.8 |
| ncs2 family permease | EQ825_04920 | Not Available | Positive | 1014420 - 1015757 | 46829.7 |
| nad(p)h-dependent chromate oxidoreductase yief | EQ825_04925 | Not Available | Negative | 1015811 - 1016377 | 20377.8 |
| hypothetical protein | EQ825_04930 | Not Available | Negative | 1016399 - 1017148 | 27680.3 |
| hth-type transcriptional regulator yidz | EQ825_04935 | Not Available | Negative | 1017305 - 1018264 | 36833.8 |
| multidrug efflux mfs transporter mdtl | EQ825_04940 | Not Available | Negative | 1018239 - 1019414 | 41491.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





