Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type 1 fimbriae regulatory protein fime | EQ825_04640 | Not Available | Negative | 951402 - 951998 | 23117.6 |
| type 1 fimbriae regulatory protein fimb | EQ825_04645 | Not Available | Negative | 952476 - 953078 | 22994.8 |
| n-acetylneuraminic acid outer membrane channel protein nanc | EQ825_04650 | Not Available | Positive | 954534 - 955250 | 27889.4 |
| yjht family mutarotase | EQ825_04655 | Not Available | Positive | 955270 - 956376 | 39602.3 |
| sialate o-acetylesterase | EQ825_04660 | Not Available | Positive | 956440 - 957420 | 36780.8 |
| hnh endonuclease | EQ825_04665 | Not Available | Negative | 957428 - 957550 | 4554.74 |
| hnh endonuclease | EQ825_04670 | Not Available | Positive | 957632 - 958504 | 33184.6 |
| hypothetical protein | EQ825_04675 | Not Available | Positive | 958817 - 959119 | 12007.3 |
| type iii restriction endonuclease subunit r | EQ825_04680 | Not Available | Negative | 959166 - 962546 | 129971.0 |
| site-specific dna-methyltransferase | EQ825_04685 | Not Available | Negative | 962549 - 964105 | 58569.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





