Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inverse autotransporter beta-barrel domain-containing protein | EQ825_04540 | Not Available | Positive | 927226 - 932466 | 188250.0 |
| rna 2'-phosphotransferase | EQ825_04545 | Not Available | Negative | 932590 - 933174 | 21589.9 |
| hypothetical protein | EQ825_04550 | Not Available | Positive | 933424 - 934107 | 23794.8 |
| hypothetical protein | EQ825_04555 | Not Available | Positive | 934104 - 934565 | 16194.5 |
| beta-aspartyl-peptidase | EQ825_04560 | Not Available | Positive | 934578 - 935750 | 41103.3 |
| hth-type transcriptional regulator | EQ825_04565 | Not Available | Positive | 935815 - 936726 | 34698.6 |
| anti-adapter protein irad | EQ825_04570 | Not Available | Negative | 936719 - 937111 | 14792.7 |
| irad leader peptide | EQ825_04575 | Not Available | Negative | 937108 - 937191 | 3016.48 |
| duf2686 family protein | EQ825_04580 | Not Available | Positive | 937784 - 938614 | 30826.8 |
| uxu operon transcriptional regulator | EQ825_04585 | Not Available | Negative | 938755 - 939528 | 29291.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





