Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | EQ825_04420 | Not Available | Positive | 900845 - 902206 | 49415.4 |
| methyl-accepting chemotaxis protein | EQ825_04425 | Not Available | Negative | 902255 - 903919 | 59884.0 |
| carbon starvation protein a | EQ825_04435 | Not Available | Positive | 904982 - 907132 | 77314.5 |
| ybdd/yjix family protein | EQ825_04440 | Not Available | Positive | 907182 - 907385 | 7729.24 |
| gtpase | EQ825_04445 | Not Available | Positive | 907396 - 908352 | 35694.9 |
| duf2075 domain-containing protein | EQ825_04450 | Not Available | Positive | 908676 - 910526 | 70707.5 |
| endoribonuclease syme | EQ825_04460 | Not Available | Positive | 911180 - 911521 | 12250.8 |
| duf1524 domain-containing protein | EQ825_04465 | Not Available | Negative | 911568 - 912731 | 45270.9 |
| duf1127 domain-containing protein | EQ825_04475 | Not Available | Negative | 913758 - 913922 | 6838.34 |
| plp-dependent aminotransferase family protein | EQ825_04480 | Not Available | Positive | 914099 - 915511 | 53122.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





