Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| purine-nucleoside phosphorylase | EQ825_04270 | Not Available | Negative | 874134 - 874853 | 25951.4 |
| phosphopentomutase | EQ825_04275 | Not Available | Negative | 874910 - 876133 | 44372.4 |
| thymidine phosphorylase | EQ825_04280 | Not Available | Negative | 876185 - 877507 | 47182.9 |
| deoxyribose-phosphate aldolase | EQ825_04285 | Not Available | Negative | 877634 - 878413 | 27735.3 |
| yjji family glycine radical enzyme | EQ825_04290 | Not Available | Positive | 878671 - 880221 | 58023.3 |
| yjjw family glycine radical enzyme activase | EQ825_04295 | Not Available | Positive | 880193 - 881056 | 31479.3 |
| metal-dependent hydrolase | EQ825_04300 | Not Available | Negative | 881270 - 882052 | 28985.9 |
| patatin family protein | EQ825_04305 | Not Available | Negative | 882049 - 883122 | 39834.1 |
| duf1328 domain-containing protein | EQ825_04310 | Not Available | Negative | 883244 - 883423 | 6238.2 |
| molecular chaperone osmy | EQ825_04315 | Not Available | Negative | 883532 - 884137 | 21074.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





