Paenarthrobacter ureafaciens strain DSM 20126 10quiver

Gram-positiveRod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Micrococcaceae

Genus

Paenarthrobacter

Description

Paenarthrobacter ureafaciens strain DSM 20126, a Gram-positive bacterium, is characterized by its rod shape and presence of flagella, which may contribute to its motility in various environments. This strain is mesophilic, with an optimal growth temperature of 29°C, indicating its preference for moderate temperatures typically found in agricultural settings. The primary habitats of Paenarthrobacter ureafaciens strain DSM 20126 include agricultural soils, the roots of cogon grass, the rhizosphere of maize, and wastewater from atrazine manufacturing plants. This suggests a versatile ecological role, possibly in nutrient cycling and plant interaction within these environments. The bacterium’s presence in the rhizosphere indicates potential involvement in plant-microbe interactions, which can influence plant health and soil fertility. Additionally, the strain has a single replicon, as indicated by the accession SBHM00000000.1. The ecological significance of Paenarthrobacter ureafaciens lies in its adaptability to diverse environments, including those impacted by agricultural practices and pollutants, such as atrazine. Its ability to thrive in these varied habitats may highlight its role in bioremediation processes and soil health improvement, particularly in agricultural systems.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrococcaceae
GenusPaenarthrobacter
SpeciesPaenarthrobacter ureafaciens
Strainstrain DSM 20126 10quiver

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Paenarthrobacter ureafaciens strain DSM 20126 10quiver
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature29
Temperature rangemesophilic
Habitatagricultural soils; cogon grass roots; maize rhizosphere; wastewater of atrazine plants
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paenarthrobacter ureafaciens strain DSM 20126 10quiver, whole

Gene Summary

Adenine Count

808499 bp

Thymine Count

802821 bp

Guanine Count

1397240 bp

Cytosine Count

1393372 bp

Genome Length

4402707 bp

Protein-coding Genes

3890 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
class ii fumarate hydrataseAUR_16250Not AvailableNegative3508790 - 351021750090.5
carbonic anhydraseAUR_16255Not AvailableNegative3510305 - 351091921803.0
duf4245 domain-containing proteinAUR_16260Not AvailableNegative3510972 - 351185930721.4
class ii fructose-bisphosphataseAUR_16265Not AvailablePositive3511844 - 351288136672.8
peptidoglycan bridge formation glycyltransferase fema/femb family proteinAUR_16270Not AvailableNegative3513041 - 351400334877.6
mannose-6-phosphate isomerase, class iAUR_16275Not AvailableNegative3514006 - 351525643926.6
lytr family transcriptional regulatorAUR_16280Not AvailableNegative3515302 - 351696358438.4
5-(carboxyamino)imidazole ribonucleotide mutaseAUR_16285Not AvailableNegative3516984 - 351754719472.6
5-(carboxyamino)imidazole ribonucleotide synthaseAUR_16290Not AvailableNegative3517544 - 351872841441.2
gtra family proteinAUR_16295Not AvailablePositive3518966 - 351953821126.6

Displaying genes 3191 – 3200 of 3961 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.