Sinirhodobacter populi strain 07D10-4-3 121

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Genus

Paenirhodobacter

Description

Sinirhodobacter populi strain 07D10-4-3 121 is characterized by a single replicon and is cataloged under the accession number SAUY00000000.1. This strain belongs to the genus Sinirhodobacter, which is known for its potential ecological roles, particularly in relation to carbon cycling and the degradation of organic materials. The presence of a single replicon indicates a streamlined genomic architecture, which may be advantageous for efficient replication and regulation of essential cellular functions. The accession number provided allows for further exploration of the genomic information, facilitating studies on its metabolic capabilities and ecological interactions. Given the characteristics associated with Sinirhodobacter species, strain 07D10-4-3 121 may contribute to the microbial community dynamics within its environment, potentially influencing nutrient cycling processes. The ecological insights drawn from the study of such microorganisms can enhance our understanding of their roles in diverse ecosystems, particularly in soil and aquatic environments where they may participate in the degradation of organic compounds. In summary, Sinirhodobacter populi strain 07D10-4-3 121, with its single replicon and specific accession, represents a valuable subject for research into microbial ecology and the functional roles of bacteria in environmental processes.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sinirhodobacter populi strain 07D10-4-3 121, whole genome shotgun

Gene Summary

Adenine Count

807831 bp

Thymine Count

805427 bp

Guanine Count

1528303 bp

Cytosine Count

1524972 bp

Genome Length

4676165 bp

Protein-coding Genes

4253 genes

Non-Coding Genes

142 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
carboxymuconolactone decarboxylase family proteinD2T29_16060Not AvailableNegative3356321 - 335666511876.2
glucose 1-dehydrogenaseD2T29_16065Not AvailableNegative3356662 - 335745027283.4
acetoin dehydrogenase dihydrolipoyllysine-residue acetyltransferase subunitD2T29_16070Not AvailableNegative3357506 - 335860938387.1
alpha-ketoacid dehydrogenase subunit betaD2T29_16075Not AvailableNegative3358611 - 335961835855.2
thiamine pyrophosphate-dependent dehydrogenase e1 component subunit alphaD2T29_16080Not AvailableNegative3359632 - 336061234816.2
acetoin catabolism protein xD2T29_16085Not AvailableNegative3360633 - 336164635763.6
rna polymerase subunit sigma-54D2T29_16090Not AvailablePositive3361738 - 336293443950.7
iron-containing alcohol dehydrogenaseD2T29_16110Not AvailableNegative3364403 - 336550937951.1
shikimate dehydrogenaseD2T29_16115Not AvailablePositive3365613 - 336645228530.6
nad(p)/fad-dependent oxidoreductaseD2T29_16120Not AvailableNegative3366449 - 336825167154.4

Displaying genes 3201 – 3210 of 4396 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.