Sinirhodobacter populi strain 07D10-4-3 121

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Genus

Paenirhodobacter

Description

Sinirhodobacter populi strain 07D10-4-3 121 is characterized by a single replicon and is cataloged under the accession number SAUY00000000.1. This strain belongs to the genus Sinirhodobacter, which is known for its potential ecological roles, particularly in relation to carbon cycling and the degradation of organic materials. The presence of a single replicon indicates a streamlined genomic architecture, which may be advantageous for efficient replication and regulation of essential cellular functions. The accession number provided allows for further exploration of the genomic information, facilitating studies on its metabolic capabilities and ecological interactions. Given the characteristics associated with Sinirhodobacter species, strain 07D10-4-3 121 may contribute to the microbial community dynamics within its environment, potentially influencing nutrient cycling processes. The ecological insights drawn from the study of such microorganisms can enhance our understanding of their roles in diverse ecosystems, particularly in soil and aquatic environments where they may participate in the degradation of organic compounds. In summary, Sinirhodobacter populi strain 07D10-4-3 121, with its single replicon and specific accession, represents a valuable subject for research into microbial ecology and the functional roles of bacteria in environmental processes.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sinirhodobacter populi strain 07D10-4-3 121, whole genome shotgun

Gene Summary

Adenine Count

807831 bp

Thymine Count

805427 bp

Guanine Count

1528303 bp

Cytosine Count

1524972 bp

Genome Length

4676165 bp

Protein-coding Genes

4253 genes

Non-Coding Genes

142 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
shikimate dehydrogenaseD2T29_15040Not AvailableNegative3152367 - 315320929560.6
gmc family oxidoreductaseD2T29_15045Not AvailableNegative3153226 - 315475254660.2
helix-turn-helix domain-containing proteinD2T29_15050Not AvailablePositive3154863 - 315573232633.6
mfs transporterD2T29_15055Not AvailablePositive3156017 - 315720741416.8
sugar abc transporter atp-binding proteinD2T29_15060Not AvailableNegative3157240 - 315809430948.0
abc transporter permeaseD2T29_15065Not AvailableNegative3158016 - 315909238015.3
sugar abc transporter substrate-binding proteinD2T29_15070Not AvailableNegative3159197 - 316021935178.0
rok family transcriptional regulatorD2T29_15075Not AvailablePositive3160469 - 316161740971.8
arac family transcriptional regulatorD2T29_15080Not AvailableNegative3161661 - 316256333118.1
sdr family nad(p)-dependent oxidoreductaseD2T29_15085Not AvailablePositive3162768 - 316370933028.0

Displaying genes 3041 – 3050 of 4396 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.