Sinirhodobacter populi strain 07D10-4-3 121

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Genus

Paenirhodobacter

Description

Sinirhodobacter populi strain 07D10-4-3 121 is characterized by a single replicon and is cataloged under the accession number SAUY00000000.1. This strain belongs to the genus Sinirhodobacter, which is known for its potential ecological roles, particularly in relation to carbon cycling and the degradation of organic materials. The presence of a single replicon indicates a streamlined genomic architecture, which may be advantageous for efficient replication and regulation of essential cellular functions. The accession number provided allows for further exploration of the genomic information, facilitating studies on its metabolic capabilities and ecological interactions. Given the characteristics associated with Sinirhodobacter species, strain 07D10-4-3 121 may contribute to the microbial community dynamics within its environment, potentially influencing nutrient cycling processes. The ecological insights drawn from the study of such microorganisms can enhance our understanding of their roles in diverse ecosystems, particularly in soil and aquatic environments where they may participate in the degradation of organic compounds. In summary, Sinirhodobacter populi strain 07D10-4-3 121, with its single replicon and specific accession, represents a valuable subject for research into microbial ecology and the functional roles of bacteria in environmental processes.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sinirhodobacter populi strain 07D10-4-3 121, whole genome shotgun

Gene Summary

Adenine Count

807831 bp

Thymine Count

805427 bp

Guanine Count

1528303 bp

Cytosine Count

1524972 bp

Genome Length

4676165 bp

Protein-coding Genes

4253 genes

Non-Coding Genes

142 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribokinaseD2T29_07520Not AvailableNegative1619151 - 162003830274.9
nadp-dependent malic enzymeD2T29_07525Not AvailableNegative1620050 - 162231781349.4
dna mismatch repair protein mutsD2T29_07530Not AvailablePositive1622426 - 162506595427.0
nucleotide exchange factor grpeD2T29_07535Not AvailableNegative1625276 - 162582420326.9
heat-inducible transcriptional repressor hrcaD2T29_07540Not AvailableNegative1625821 - 162688538641.2
ribonuclease phD2T29_07545Not AvailablePositive1627002 - 162771524935.9
coproporphyrinogen iii oxidaseD2T29_07555Not AvailablePositive1628689 - 162984643115.0
parb/repb/spo0j family partition proteinD2T29_07560Not AvailableNegative1629850 - 163073732809.3
para family proteinD2T29_07565Not AvailableNegative1630741 - 163155329347.3
16s rrna (guanine(527)-n(7))-methyltransferase rsmgD2T29_07570Not AvailableNegative1631546 - 163216922904.7

Displaying genes 1571 – 1580 of 4396 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.