Sinirhodobacter populi strain 2D-5 74

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Genus

Paenirhodobacter

Description

Sinirhodobacter populi strain 2D-5 74 is characterized by a single replicon, indicating a streamlined genomic structure typical of certain bacterial species. The strain's genomic data is cataloged under the accession number SAUW00000000.1. This accession provides a reference point for further research and comparison with other microbial taxa. As a member of the Sinirhodobacter genus, strain 2D-5 74 is likely to exhibit traits associated with this group, which typically includes adaptations to specific ecological niches. Although specific metabolic capabilities or ecological roles are not detailed, members of Sinirhodobacter are often associated with environmental processes, particularly in relation to their interactions within microbial communities. The streamlined genomic architecture of Sinirhodobacter populi strain 2D-5 74 may suggest an adaptation to particular environmental conditions, enabling efficient resource utilization and survival. This characteristic can have implications for its ecological roles, particularly in biogeochemical cycles where such bacteria can be pivotal in nutrient cycling and organic matter decomposition. Overall, the single replicon and the associated genomic accessions provide a foundation for understanding the ecological significance of Sinirhodobacter populi strain 2D-5 74 within its habitat, reflecting the complex interactions that define microbial ecosystems. Further research could elucidate its specific contributions to environmental processes.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sinirhodobacter populi strain 2D-5 74, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3980 genes

Non-Coding Genes

170 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-binding cassette domain-containing proteinD2T33_19595Not AvailablePositive4124411 - 412550838768.7
abc transporter permeaseD2T33_19600Not AvailablePositive4125489 - 412614222896.8
llm class flavin-dependent oxidoreductaseD2T33_19605Not AvailableNegative4126286 - 412766250632.7
sfnb family sulfur acquisition oxidoreductaseD2T33_19610Not AvailableNegative4127662 - 412889744586.9
sfnb family sulfur acquisition oxidoreductaseD2T33_19615Not AvailableNegative4128866 - 413010144682.9
cold-shock proteinD2T33_19620Not AvailablePositive4130480 - 41306867454.69
hypothetical proteinD2T33_19625Not AvailablePositive4130742 - 41309577442.95
hypothetical proteinD2T33_19630Not AvailablePositive4131004 - 41312077170.23
laci family dna-binding transcriptional regulatorD2T33_19635Not AvailableNegative4131615 - 413262236952.5
carbohydrate abc transporter substrate-binding proteinD2T33_19640Not AvailablePositive4132836 - 413408344771.7

Displaying genes 3821 – 3830 of 4150 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.