Sinirhodobacter populi strain 2D-5 74

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Genus

Paenirhodobacter

Description

Sinirhodobacter populi strain 2D-5 74 is characterized by a single replicon, indicating a streamlined genomic structure typical of certain bacterial species. The strain's genomic data is cataloged under the accession number SAUW00000000.1. This accession provides a reference point for further research and comparison with other microbial taxa. As a member of the Sinirhodobacter genus, strain 2D-5 74 is likely to exhibit traits associated with this group, which typically includes adaptations to specific ecological niches. Although specific metabolic capabilities or ecological roles are not detailed, members of Sinirhodobacter are often associated with environmental processes, particularly in relation to their interactions within microbial communities. The streamlined genomic architecture of Sinirhodobacter populi strain 2D-5 74 may suggest an adaptation to particular environmental conditions, enabling efficient resource utilization and survival. This characteristic can have implications for its ecological roles, particularly in biogeochemical cycles where such bacteria can be pivotal in nutrient cycling and organic matter decomposition. Overall, the single replicon and the associated genomic accessions provide a foundation for understanding the ecological significance of Sinirhodobacter populi strain 2D-5 74 within its habitat, reflecting the complex interactions that define microbial ecosystems. Further research could elucidate its specific contributions to environmental processes.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sinirhodobacter populi strain 2D-5 74, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3980 genes

Non-Coding Genes

170 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
branched-chain amino acid abc transporter permeaseD2T33_18600Not AvailableNegative3920330 - 392120531469.1
abc transporter substrate-binding proteinD2T33_18605Not AvailableNegative3921296 - 392253744764.8
gntr family transcriptional regulatorD2T33_18610Not AvailablePositive3922665 - 392338426473.6
sdr family oxidoreductaseD2T33_18615Not AvailablePositive3923368 - 392413526725.2
fad-binding proteinD2T33_18620Not AvailablePositive3924322 - 392570448932.4
protein-methionine-sulfoxide reductase heme-binding subunit msrqD2T33_18625Not AvailableNegative3926123 - 392668921215.2
protein-methionine-sulfoxide reductase catalytic subunit msrpD2T33_18630Not AvailableNegative3926689 - 392761534153.7
ssra-binding protein smpbD2T33_18635Not AvailablePositive3927738 - 392821117943.7
3-mercaptopyruvate sulfurtransferaseD2T33_18640Not AvailablePositive3928293 - 392915031070.8
aspartate/tyrosine/aromatic aminotransferaseD2T33_18645Not AvailablePositive3929150 - 393033142727.4

Displaying genes 3631 – 3640 of 4150 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.