Sinirhodobacter populi strain 2D-5 74

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Genus

Paenirhodobacter

Description

Sinirhodobacter populi strain 2D-5 74 is characterized by a single replicon, indicating a streamlined genomic structure typical of certain bacterial species. The strain's genomic data is cataloged under the accession number SAUW00000000.1. This accession provides a reference point for further research and comparison with other microbial taxa. As a member of the Sinirhodobacter genus, strain 2D-5 74 is likely to exhibit traits associated with this group, which typically includes adaptations to specific ecological niches. Although specific metabolic capabilities or ecological roles are not detailed, members of Sinirhodobacter are often associated with environmental processes, particularly in relation to their interactions within microbial communities. The streamlined genomic architecture of Sinirhodobacter populi strain 2D-5 74 may suggest an adaptation to particular environmental conditions, enabling efficient resource utilization and survival. This characteristic can have implications for its ecological roles, particularly in biogeochemical cycles where such bacteria can be pivotal in nutrient cycling and organic matter decomposition. Overall, the single replicon and the associated genomic accessions provide a foundation for understanding the ecological significance of Sinirhodobacter populi strain 2D-5 74 within its habitat, reflecting the complex interactions that define microbial ecosystems. Further research could elucidate its specific contributions to environmental processes.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sinirhodobacter populi strain 2D-5 74, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3980 genes

Non-Coding Genes

170 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf2794 domain-containing proteinD2T33_08990Not AvailableNegative1938009 - 193835312910.8
ornithine cyclodeaminaseD2T33_08995Not AvailableNegative1938757 - 193982438619.4
arginaseD2T33_09000Not AvailableNegative1939824 - 194075032861.6
lrp/asnc family transcriptional regulatorD2T33_09005Not AvailablePositive1940874 - 194130215453.5
murr/rpir family transcriptional regulatorD2T33_09010Not AvailablePositive1941426 - 194230431732.1
transporter substrate-binding domain-containing proteinD2T33_09015Not AvailablePositive1942327 - 194309727765.3
abc transporter permeaseD2T33_09020Not AvailablePositive1943108 - 194381525311.6
abc transporter permeaseD2T33_09025Not AvailablePositive1943815 - 194452826532.7
o-succinylbenzoate synthaseD2T33_09030Not AvailablePositive1944525 - 194565240947.0
gnat family n-acetyltransferaseD2T33_09035Not AvailablePositive1945649 - 194634724996.9

Displaying genes 1821 – 1830 of 4150 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.