Sinirhodobacter populi strain 2D-5 74

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Genus

Paenirhodobacter

Description

Sinirhodobacter populi strain 2D-5 74 is characterized by a single replicon, indicating a streamlined genomic structure typical of certain bacterial species. The strain's genomic data is cataloged under the accession number SAUW00000000.1. This accession provides a reference point for further research and comparison with other microbial taxa. As a member of the Sinirhodobacter genus, strain 2D-5 74 is likely to exhibit traits associated with this group, which typically includes adaptations to specific ecological niches. Although specific metabolic capabilities or ecological roles are not detailed, members of Sinirhodobacter are often associated with environmental processes, particularly in relation to their interactions within microbial communities. The streamlined genomic architecture of Sinirhodobacter populi strain 2D-5 74 may suggest an adaptation to particular environmental conditions, enabling efficient resource utilization and survival. This characteristic can have implications for its ecological roles, particularly in biogeochemical cycles where such bacteria can be pivotal in nutrient cycling and organic matter decomposition. Overall, the single replicon and the associated genomic accessions provide a foundation for understanding the ecological significance of Sinirhodobacter populi strain 2D-5 74 within its habitat, reflecting the complex interactions that define microbial ecosystems. Further research could elucidate its specific contributions to environmental processes.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sinirhodobacter populi strain 2D-5 74, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3980 genes

Non-Coding Genes

170 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
holliday junction branch migration dna helicase ruvbD2T33_06395Not AvailableNegative1406199 - 140722737734.6
holliday junction branch migration protein ruvaD2T33_06400Not AvailableNegative1407326 - 140798222760.8
crossover junction endodeoxyribonuclease ruvcD2T33_06405Not AvailableNegative1407979 - 140853019327.6
duf1127 domain-containing proteinD2T33_06410Not AvailablePositive1408877 - 14090656795.97
50s ribosomal protein l11 methyltransferaseD2T33_06415Not AvailableNegative1409130 - 140999630369.1
aspartate aminotransferase family proteinD2T33_06420Not AvailablePositive1410312 - 141148741086.7
ornithine carbamoyltransferaseD2T33_06425Not AvailablePositive1411528 - 141245434259.9
peptidoglycan-binding proteinD2T33_06430Not AvailableNegative1412473 - 141288314090.9
2fe-2s iron-sulfur cluster binding domain-containing proteinD2T33_06435Not AvailablePositive1413022 - 141334511935.3
adenylosuccinate synthaseD2T33_06440Not AvailablePositive1413440 - 141473846686.9

Displaying genes 1311 – 1320 of 4150 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.