Sinirhodobacter populi strain 2D-5 74

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Genus

Paenirhodobacter

Description

Sinirhodobacter populi strain 2D-5 74 is characterized by a single replicon, indicating a streamlined genomic structure typical of certain bacterial species. The strain's genomic data is cataloged under the accession number SAUW00000000.1. This accession provides a reference point for further research and comparison with other microbial taxa. As a member of the Sinirhodobacter genus, strain 2D-5 74 is likely to exhibit traits associated with this group, which typically includes adaptations to specific ecological niches. Although specific metabolic capabilities or ecological roles are not detailed, members of Sinirhodobacter are often associated with environmental processes, particularly in relation to their interactions within microbial communities. The streamlined genomic architecture of Sinirhodobacter populi strain 2D-5 74 may suggest an adaptation to particular environmental conditions, enabling efficient resource utilization and survival. This characteristic can have implications for its ecological roles, particularly in biogeochemical cycles where such bacteria can be pivotal in nutrient cycling and organic matter decomposition. Overall, the single replicon and the associated genomic accessions provide a foundation for understanding the ecological significance of Sinirhodobacter populi strain 2D-5 74 within its habitat, reflecting the complex interactions that define microbial ecosystems. Further research could elucidate its specific contributions to environmental processes.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sinirhodobacter populi strain 2D-5 74, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3980 genes

Non-Coding Genes

170 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tripartite tricarboxylate transporter tctb family proteinD2T33_06095Not AvailableNegative1338272 - 133878418322.2
tripartite tricarboxylate transporter substrate binding protein bugdD2T33_06100Not AvailableNegative1338774 - 133974834138.7
sigma-54-dependent fis family transcriptional regulatorD2T33_06105Not AvailableNegative1339931 - 134126848599.3
acetone carboxylase subunit gammaD2T33_06110Not AvailableNegative1341761 - 134226119709.6
acetone carboxylase subunit alphaD2T33_06115Not AvailableNegative1342331 - 134464686415.2
hydantoinase/oxoprolinase family proteinD2T33_06120Not AvailableNegative1344669 - 134681378119.7
sigma-54-dependent fis family transcriptional regulatorD2T33_06125Not AvailableNegative1346946 - 134876065279.7
4-oxalomesaconate tautomeraseD2T33_06130Not AvailableNegative1348967 - 135003436486.2
4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylaseD2T33_06135Not AvailableNegative1350027 - 135069823463.2
catechol 2,3-dioxygenaseD2T33_06140Not AvailableNegative1350702 - 135167036255.1

Displaying genes 1251 – 1260 of 4150 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.