Leucothrix sargassi strain C3212

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Thiotrichales

Family

Thiotrichaceae

Genus

Leucothrix

Description

Leucothrix sargassi strain C3212 is characterized by having a single replicon. This trait indicates a streamlined genetic organization, which can be advantageous for its adaptability and replication efficiency. The strain is documented under the accession number SADG00000000.1, providing a reference for researchers interested in its genomic features and potential applications. The single replicon structure suggests that Leucothrix sargassi strain C3212 may exhibit traits common to other microorganisms that possess a simplified genomic architecture, potentially allowing for rapid growth and responses to environmental changes. This could be particularly relevant in the microbial ecosystem where this strain resides, as it may enhance its competitive edge against other microorganisms. An ecological insight into Leucothrix sargassi strain C3212 could involve its role in the aquatic environments where it is typically found. Given that Leucothrix species are often associated with marine habitats, this strain might contribute to biogeochemical cycles, such as nutrient cycling and organic matter decomposition. The streamlined genetic makeup may facilitate adaptability to changing environmental conditions, thereby influencing its ecological interactions within its habitat. Understanding these traits can provide valuable insights into the functional roles of microorganisms in marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderThiotrichales
FamilyThiotrichaceae
GenusLeucothrix
SpeciesLeucothrix sargassi
Strainstrain C3212

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Leucothrix sargassi strain C3212 contig214, whole genome shotgun

Gene Summary

Adenine Count

1888976 bp

Thymine Count

1924560 bp

Guanine Count

1543113 bp

Cytosine Count

1493131 bp

Genome Length

6864584 bp

Protein-coding Genes

6021 genes

Non-Coding Genes

128 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sua5/ycio/yrdc/ywlc family proteinEOL70_24115Not AvailableNegative5379744 - 538034921868.2
dna-protecting protein dpraEOL70_24120Not AvailableNegative5380399 - 538162844735.9
lysm peptidoglycan-binding domain-containing proteinEOL70_24125Not AvailableNegative5381798 - 538290139613.9
peptide deformylaseEOL70_24130Not AvailablePositive5383265 - 538379520192.2
imidazoleglycerol-phosphate dehydratase hisbEOL70_24135Not AvailablePositive5383818 - 538442022263.6
yajq family cyclic di-gmp-binding proteinEOL70_24140Not AvailableNegative5384513 - 538500118324.0
glutathione peroxidaseEOL70_24145Not AvailablePositive5385281 - 538602727372.2
atp-binding cassette domain-containing proteinEOL70_24150Not AvailableNegative5386077 - 538805074055.2
iron-sulfur cluster insertion protein erpaEOL70_24155Not AvailablePositive5388184 - 538851611818.5
roadblock/lc7 domain-containing proteinEOL70_24160Not AvailablePositive5388902 - 538925812942.5

Displaying genes 4791 – 4800 of 6149 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.