Leucothrix sargassi strain C3212

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Thiotrichales

Family

Thiotrichaceae

Genus

Leucothrix

Description

Leucothrix sargassi strain C3212 is characterized by having a single replicon. This trait indicates a streamlined genetic organization, which can be advantageous for its adaptability and replication efficiency. The strain is documented under the accession number SADG00000000.1, providing a reference for researchers interested in its genomic features and potential applications. The single replicon structure suggests that Leucothrix sargassi strain C3212 may exhibit traits common to other microorganisms that possess a simplified genomic architecture, potentially allowing for rapid growth and responses to environmental changes. This could be particularly relevant in the microbial ecosystem where this strain resides, as it may enhance its competitive edge against other microorganisms. An ecological insight into Leucothrix sargassi strain C3212 could involve its role in the aquatic environments where it is typically found. Given that Leucothrix species are often associated with marine habitats, this strain might contribute to biogeochemical cycles, such as nutrient cycling and organic matter decomposition. The streamlined genetic makeup may facilitate adaptability to changing environmental conditions, thereby influencing its ecological interactions within its habitat. Understanding these traits can provide valuable insights into the functional roles of microorganisms in marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderThiotrichales
FamilyThiotrichaceae
GenusLeucothrix
SpeciesLeucothrix sargassi
Strainstrain C3212

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Leucothrix sargassi strain C3212 contig214, whole genome shotgun

Gene Summary

Adenine Count

1888976 bp

Thymine Count

1924560 bp

Guanine Count

1543113 bp

Cytosine Count

1493131 bp

Genome Length

6864584 bp

Protein-coding Genes

6021 genes

Non-Coding Genes

128 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf3108 domain-containing proteinEOL70_17975Not AvailablePositive4031074 - 403176925527.7
hypothetical proteinEOL70_17980Not AvailablePositive4032042 - 403344549708.7
lysr family transcriptional regulatorEOL70_17985Not AvailableNegative4033497 - 403438732957.9
3-isopropylmalate dehydratase large subunitEOL70_17990Not AvailablePositive4034635 - 403605350670.3
3-isopropylmalate dehydratase small subunitEOL70_17995Not AvailablePositive4036063 - 403671324414.7
hypothetical proteinEOL70_18000Not AvailablePositive4037017 - 403765523252.1
3-isopropylmalate dehydrogenaseEOL70_18005Not AvailablePositive4037802 - 403887238512.1
murein l,d-transpeptidaseEOL70_18010Not AvailablePositive4039040 - 404040749224.4
hypothetical proteinEOL70_18015Not AvailableNegative4040462 - 40406868763.71
peptidoglycan-binding protein lysmEOL70_18025Not AvailableNegative4042654 - 404316318210.3

Displaying genes 3581 – 3590 of 6149 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.