Leucothrix sargassi strain C3212

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Thiotrichales

Family

Thiotrichaceae

Genus

Leucothrix

Description

Leucothrix sargassi strain C3212 is characterized by having a single replicon. This trait indicates a streamlined genetic organization, which can be advantageous for its adaptability and replication efficiency. The strain is documented under the accession number SADG00000000.1, providing a reference for researchers interested in its genomic features and potential applications. The single replicon structure suggests that Leucothrix sargassi strain C3212 may exhibit traits common to other microorganisms that possess a simplified genomic architecture, potentially allowing for rapid growth and responses to environmental changes. This could be particularly relevant in the microbial ecosystem where this strain resides, as it may enhance its competitive edge against other microorganisms. An ecological insight into Leucothrix sargassi strain C3212 could involve its role in the aquatic environments where it is typically found. Given that Leucothrix species are often associated with marine habitats, this strain might contribute to biogeochemical cycles, such as nutrient cycling and organic matter decomposition. The streamlined genetic makeup may facilitate adaptability to changing environmental conditions, thereby influencing its ecological interactions within its habitat. Understanding these traits can provide valuable insights into the functional roles of microorganisms in marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderThiotrichales
FamilyThiotrichaceae
GenusLeucothrix
SpeciesLeucothrix sargassi
Strainstrain C3212

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Leucothrix sargassi strain C3212 contig214, whole genome shotgun

Gene Summary

Adenine Count

1888976 bp

Thymine Count

1924560 bp

Guanine Count

1543113 bp

Cytosine Count

1493131 bp

Genome Length

6864584 bp

Protein-coding Genes

6021 genes

Non-Coding Genes

128 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribose-phosphate pyrophosphokinaseEOL70_13645Not AvailableNegative3042229 - 304318834720.8
Trna-glnNot AvailableNot AvailablePositive3043246 - 3043320Not Available
4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinaseEOL70_13655Not AvailableNegative3043330 - 304419931498.8
outer membrane lipoprotein lolbEOL70_13660Not AvailableNegative3044184 - 304483724350.7
tetratricopeptide repeat proteinEOL70_13665Not AvailableNegative3044890 - 304663565111.7
glutamyl-trna reductaseEOL70_13670Not AvailablePositive3046879 - 304815646663.5
peptide chain release factor 1EOL70_13675Not AvailablePositive3048156 - 304923840318.5
peptide chain release factor n(5)-glutamine methyltransferaseEOL70_13680Not AvailablePositive3049244 - 305007730754.7
type iv pilin proteinEOL70_13685Not AvailableNegative3050080 - 305055916999.8
hypothetical proteinEOL70_13690Not AvailableNegative3050626 - 305112917087.6

Displaying genes 2721 – 2730 of 6149 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.