Rheinheimera riviphila strain KYPC3

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Chromatiales

Family

Chromatiaceae

Genus

Rheinheimera

Description

Rheinheimera riviphila strain KYPC3 is a Gram-negative bacterium characterized by its rod-shaped morphology. This strain is notable for having a single replicon, which is a key feature of its genetic makeup. The genomic data for Rheinheimera riviphila strain KYPC3 is accessible under the accession number SACS00000000.1. As a member of the Rheinheimera genus, this bacterium may have specific ecological roles, particularly in aquatic environments, where members of this genus are commonly found. The Gram-negative nature of Rheinheimera riviphila strain KYPC3 suggests that it possesses an outer membrane, which can contribute to its survival in various habitats by providing a barrier against certain environmental stressors. The single replicon indicates a streamlined genomic structure, which may influence the bacterium's metabolic capabilities and adaptability. Understanding the characteristics of Rheinheimera riviphila strain KYPC3 can provide insights into its ecological role, particularly in nutrient cycling and interactions within microbial communities in freshwater ecosystems. This highlights the importance of studying such bacterial strains to understand their contributions to biodiversity and ecosystem functioning.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderChromatiales
FamilyChromatiaceae
GenusRheinheimera
SpeciesRheinheimera riviphila
Strainstrain KYPC3

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Rheinheimera riviphila strain KYPC3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rheinheimera riviphila strain KYPC3 NODE_115_length_200_cov_16,

Gene Summary

Adenine Count

1194577 bp

Thymine Count

1187677 bp

Guanine Count

1184602 bp

Cytosine Count

1180378 bp

Genome Length

4756064 bp

Protein-coding Genes

3965 genes

Non-Coding Genes

81 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
iclr family transcriptional regulatorEOE67_17580Not AvailablePositive4100244 - 410102028055.3
laci family dna-binding transcriptional regulatorEOE67_17585Not AvailablePositive4101076 - 410211037578.0
ggdef domain-containing proteinEOE67_17590Not AvailablePositive4102211 - 4105162108331.0
phosphate abc transporter substrate-binding proteinEOE67_17595Not AvailableNegative4105230 - 410564914780.0
hypothetical proteinEOE67_17600Not AvailableNegative4105660 - 410686243856.8
glycoside hydrolase family 28 proteinEOE67_17605Not AvailablePositive4107372 - 410883552784.4
altronate dehydrataseEOE67_17610Not AvailablePositive4108918 - 411052556489.1
glucuronate isomeraseEOE67_17615Not AvailablePositive4110571 - 411198652893.6
mannitol dehydrogenase family proteinEOE67_17620Not AvailablePositive4112069 - 411367357601.4
bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolaseEOE67_17625Not AvailablePositive4113670 - 411435923342.4

Displaying genes 3491 – 3500 of 4053 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.