Rheinheimera riviphila strain KYPC3

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Chromatiales

Family

Chromatiaceae

Genus

Rheinheimera

Description

Rheinheimera riviphila strain KYPC3 is a Gram-negative bacterium characterized by its rod-shaped morphology. This strain is notable for having a single replicon, which is a key feature of its genetic makeup. The genomic data for Rheinheimera riviphila strain KYPC3 is accessible under the accession number SACS00000000.1. As a member of the Rheinheimera genus, this bacterium may have specific ecological roles, particularly in aquatic environments, where members of this genus are commonly found. The Gram-negative nature of Rheinheimera riviphila strain KYPC3 suggests that it possesses an outer membrane, which can contribute to its survival in various habitats by providing a barrier against certain environmental stressors. The single replicon indicates a streamlined genomic structure, which may influence the bacterium's metabolic capabilities and adaptability. Understanding the characteristics of Rheinheimera riviphila strain KYPC3 can provide insights into its ecological role, particularly in nutrient cycling and interactions within microbial communities in freshwater ecosystems. This highlights the importance of studying such bacterial strains to understand their contributions to biodiversity and ecosystem functioning.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderChromatiales
FamilyChromatiaceae
GenusRheinheimera
SpeciesRheinheimera riviphila
Strainstrain KYPC3

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Rheinheimera riviphila strain KYPC3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rheinheimera riviphila strain KYPC3 NODE_115_length_200_cov_16,

Gene Summary

Adenine Count

1194577 bp

Thymine Count

1187677 bp

Guanine Count

1184602 bp

Cytosine Count

1180378 bp

Genome Length

4756064 bp

Protein-coding Genes

3965 genes

Non-Coding Genes

81 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf885 domain-containing proteinEOE67_11625Not AvailableNegative2668379 - 267022969077.8
radical sam family heme chaperone hemwEOE67_11630Not AvailableNegative2670351 - 267150242472.8
rdgb/ham1 family non-canonical purine ntp pyrophosphataseEOE67_11635Not AvailableNegative2671506 - 267213222073.5
duf4426 domain-containing proteinEOE67_11640Not AvailableNegative2672179 - 267258014984.0
yggu family proteinEOE67_11645Not AvailableNegative2672667 - 267297811278.9
yggt family proteinEOE67_11650Not AvailableNegative2672999 - 267354420217.1
pyrroline-5-carboxylate reductaseEOE67_11655Not AvailableNegative2673601 - 267441628878.6
yggs family pyridoxal phosphate-dependent enzymeEOE67_11660Not AvailableNegative2674409 - 267511025322.4
type iv pilus twitching motility protein piltEOE67_11665Not AvailablePositive2675171 - 267622338681.9
pilt/pilu family type 4a pilus atpaseEOE67_11670Not AvailablePositive2676234 - 267736141224.0

Displaying genes 2311 – 2320 of 4053 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.